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Homology Directed Repair
SuperPath
Pathway network
for
Homology Directed Repair
SuperPath
8
Pathways
in the
Homology Directed Repair
SuperPath
DNA Repair
Homology Directed Repair
DNA Double-Strand Break Repair
Processing of DNA double-strand break ends
G2/M DNA damage checkpoint
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex
HDR through Homologous Recombination (HRR) or Single Strand Annealing (SSA)
HDR through MMEJ (alt-NHEJ)
346
Genes
in the
Homology Directed Repair
SuperPath
RAD50
CHEK1
MRE11
NBN
RBBP8
LOC102724334
KAT5
TOPBP1
RMI2
H4C16
H2BC26
RAD9B
RNF168
DNA2
H2BC1
BABAM1
H2AX
H2BC5
H2BC3
HUS1
ATM
PIAS4
UIMC1
ATR
H4C15
BARD1
RAD1
RAD9A
RAD17
RFC2
RFC3
RFC4
RFC5
RPA1
RPA2
RPA3
BLM
BRCA1
TOP3A
TP53BP1
UBE2N
UBE2V2
NSD2
WRN
BRCC3
RMI1
H3-4
H4C9
H2BC8
H2BC13
H2BC15
H2BC14
H2BC7
H2BC6
H2BC9
H2BC10
H2BC4
H2BC17
H2BC21
H4C1
H4C4
H4C6
H4C12
H4C11
H4C3
H4C8
H4C2
H4C5
H4C13
RHNO1
H4C14
BRIP1
ATRIP
ABRAXAS1
H2BC12
HERC2
H2BC11
RNF8
EXO1
BABAM2
MDC1
CDK2
PPP4R2
SIRT6
TIPIN
PPP4C
RAD52
RNF4
RPS27A
CLSPN
SUMO2
BRCA2
UBA52
UBB
UBC
UBE2I
CCNA2
CCNA1
TIMELESS
PARP2
RAD51AP1
POLD3
POLQ
CHEK2
PARP1
EME1
EME2
ERCC1
ERCC4
FEN1
SPIDR
ABL1
GEN1
LIG3
PCNA
POLK
RTEL1
POLE3
POLD1
POLD2
POLE
POLE2
POLH
SLX1A
POLE4
POLD4
RAD51
RAD51C
RAD51B
RAD51D
RFC1
XRCC1
XRCC2
XRCC3
SLX1B
PALB2
SEM1
MUS81
SLX4
TP53
EYA4
EYA1
EYA2
EYA3
PAXIP1
KDM4B
XRCC6
POLL
POLM
APBB1
KPNA2
LIG4
UBXN1
TDP2
RIF1
PPP5C
TDP1
PRKDC
MAPK8
DCLRE1C
SUMO1
XRCC4
XRCC5
NHEJ1
BAP1
SMARCA5
BAZ1B
KDM4A
YWHAQ
SFN
WEE1
YWHAB
YWHAE
YWHAG
YWHAH
YWHAZ
CCNB1
CDK1
CDC25C
CENPS-CORT
ISY1-RAB43
CDK7
PIAS3
MCRS1
PPIE
MAD2L2
CETN2
COPS8
ASCC3
COPS6
COPS5
POLI
PNKP
ERCC8
ALKBH2
USP43
INO80C
DDB1
DDB2
FAAP20
CENPX
EP300
ERCC2
ERCC3
ERCC5
ERCC6
FANCA
FANCC
FANCD2
FANCE
FANCB
FANCF
FANCG
ALKBH3
FAN1
SMUG1
NEIL2
RCHY1
POT1
TINF2
PRPF19
INO80E
GPS1
UBE2T
MSH6
GTF2H1
GTF2H2
GTF2H3
GTF2H4
TFPT
H2AC8
H2AC7
HMGN1
APEX1
POLN
CENPS
LIG1
GTF2H5
MGMT
MLH1
MNAT1
MPG
MSH2
MSH3
MUTYH
H2AB1
NFRKB
NTHL1
OGG1
COPS7A
ASCC1
COPS4
REV1
DTL
PMS2
POLB
POLR2A
POLR2B
POLR2C
POLR2D
POLR2E
POLR2F
POLR2G
POLR2H
POLR2I
TERF2IP
POLR2J
POLR2K
POLR2L
INO80
RNF111
ALKBH5
INO80D
ADPRS
FANCL
FANCI
NEIL3
NPLOC4
H2AJ
RAD18
XAB2
ISY1
WDR48
UVSSA
FANCM
RAD23A
RAD23B
REV3L
ACTB
COPS7B
DCLRE1B
ACD
SUMO3
BPHL
TCEA1
TDG
TERF1
TERF2
H2AC19
UBA7
UBE2B
UFD1
UNG
USP1
VCP
XPA
XPC
YY1
TRIM25
USP7
FTO
NEIL1
ACTR5
FAAP100
ELL
H2AC14
H2AC6
H2AC4
H2AC18
H2AC20
INO80B
SPRTN
ASCC2
CUL4B
CUL4A
USP45
PARG
COPS3
PIAS1
ACTL6A
RUVBL1
MBD4
CCNH
USP10
FAAP24
ZNF830
UBE2L6
COPS2
ACTR8
H2AZ2
CHD1L
ISG15
AQR
PCLAF
DCLRE1A
RBX1
*Darkness represents the genes rank within the SuperPath, via the multiplicity of each gene in the constituent pathways.
STRING interaction network
for
Homology Directed Repair
SuperPath