superpathway of choline degradation to L-serine
Pathway network for the superpathway of choline degradation to L-serine SuperPath
Sources:
- PubChem
- Reactome
Pathways in the superpathway of choline degradation to L-serine SuperPath
| # | Name | Source | Genes |
|---|---|---|---|
| 1 | superpathway of choline degradation to L-serine | PubChem | |
| 2 | Choline catabolism | Reactome | |
| 3 | glycine betaine degradation II (mammalian) | PubChem | |
| 4 | choline degradation I | PubChem | |
| 5 | choline degradation | PubChem |
Ordered by rank within the SuperPath, via the multiplicity of each gene in the constituent pathways
| # | Symbol | Description | Category | # Related Pathways |
|---|---|---|---|---|
| 1 | CHDH | Choline Dehydrogenase | Protein Coding | 4 |
| 2 | ALDH7A1 | Aldehyde Dehydrogenase 7 Family Member A1 | Protein Coding | 4 |
| 3 | DMGDH | Dimethylglycine Dehydrogenase | Protein Coding | 3 |
| 4 | SARDH | Sarcosine Dehydrogenase | Protein Coding | 3 |
| 5 | BHMT | Betaine--Homocysteine S-Methyltransferase | Protein Coding | 3 |
| 6 | SHMT2 | Serine Hydroxymethyltransferase 2 | Protein Coding | 2 |
| 7 | SHMT1 | Serine Hydroxymethyltransferase 1 | Protein Coding | 2 |
| 8 | SLC44A1 | Solute Carrier Family 44 Member 1 | Protein Coding | 1 |
Disorders associated with superpathway of choline degradation to L-serine SuperPath
according to GeneCards Suite gene sharing
| # | Disorder | Type | Genes | Score |
|---|---|---|---|---|
| 1 | Epilepsy, early-onset, 4, vitamin b6-dependent | Enrichment | ALDH7A1 | 3.83 |
| 2 | Pyridoxine-dependent-developmental and epileptic encephalopathy | Enrichment | ALDH7A1 | 3.53 |
| 3 | Dimethylglycine dehydrogenase deficiency | Enrichment | DMGDH | 3.43 |
| 4 | Sarcosinemia | Enrichment | SARDH | 3.43 |
| 5 | Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities | Enrichment | SHMT2 | 3.43 |
| 6 | Developmental and epileptic encephalopathy 13 | Enrichment | ALDH7A1 | 3.35 |
| 7 | Neurodegeneration, childhood-onset, with ataxia, tremor, optic atrophy, and cognitive decline | Enrichment | SLC44A1 | 3.35 |
| 8 | Hydrocephalus, congenital, 1 | Enrichment | ALDH7A1 | 2.63 |
| 9 | Epilepsy | Enrichment | ALDH7A1 | 2.23 |
| 10 | Congenital nervous system abnormality | Enrichment | ALDH7A1 | 1.81 |
| 11 | Nervous system disease | Enrichment | ALDH7A1 | 1.81 |